Supplementary MaterialsAdditional file 1 BAC clones analyzed with accession numbers. percent identity and their respective NCBI accession figures and origin varieties (MD= BAC G7 with identity to immunoglobulin weighty chain variable region. Regions of EB BAC G7 with identity to immunoglobulin weighty chain variable region (IGHv) in various species as recognized with NCBIs BLASTN. 1471-2164-10-334-S5.pdf (20K) GUID:?ED0A8647-9357-4759-91FC-6A9CCCB2E915 Additional file 6 Repeat distribution for 2 telomeres (11q and 16q) that are not known to be evolutionary breaks. Demonstrated are the percent of sequence identified as ERV (A, D), L1 (B, PRKM12 E), or SINE (C, Sirolimus tyrosianse inhibitor F) for the terminal 4Mb of each chromosome. 1471-2164-10-334-S6.eps (474K) GUID:?FCD2587C-B04E-4732-A8CB-B100F025D96A Additional file 7 repeat distribution of the IGH region. 0.01, red cells 0.05). Click here for file(640K, pdf) Additional file 3:Average quantity of KERV-1 elements. Average quantity of KERV-1 elements, both internal coding and LTR, estimated for each and every 100kb. Click here for file(678K, eps) Additional file 4:List of expected genes in tammar BACs. List of expected genes in tammar BACs showing percent identity and their respective NCBI accession figures and origin varieties (MD= BAC G7 with identity to immunoglobulin weighty chain variable region. Regions of EB BAC G7 with identity to immunoglobulin weighty chain variable region (IGHv) in various species as recognized with NCBIs BLASTN. Click here for file(20K, pdf) Additional file 6:Repeat distribution for 2 telomeres (11q and 16q) that are not known to be evolutionary breaks. Demonstrated are the percent of sequence identified as ERV (A, D), L1 (B, E), or SINE (C, F) for the terminal 4Mb of each chromosome. Click here for file(474K, eps) Additional file 7:repeat Sirolimus tyrosianse inhibitor distribution of the IGH region. em Monodelphis domesticus /em repeat distribution of the IGH region and approximately Sirolimus tyrosianse inhibitor 1Mb of either part. Shown are the percent of sequence identified as (A) ERV, (B) L1, (C) SINE, (D) Total repeats, and (E) Simple repeats. This region has several gaps in the genome assembly. (F) Shown are the percent of ambiguous bases found in the region. Click here for file(497K, eps) Acknowledgements We say thanks to C. Obergfell who helped maintain the cell lines used in this study and offered thoughtful conversation within the strategy. We thank the entire staff of the NIH Intramural Sequencing Center (NISC) for his or her contributions to the sequencing of BAC clones. MJO was supported by funding from your NIH and RJO by funding from your NSF..